p4

A phyloinformatic toolkit that implements tree-heterogeneous models.

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  • Introduction
  • News
  • Installation
  • Tutorials and Examples
  • Scripts for common tasks
  • Classes and Modules
    • Alignment
    • Constraints
    • Data
    • DistanceMatrix
    • GeneticCode
    • Model
    • Mcmc
    • McmcCheckPointReader
    • NexusSets
    • Node
    • Numbers
    • PosteriorSamples
    • QuartetJoining
    • ReducedStrictConsensus
    • STMcmc
    • Sequence
    • SequenceList
    • SuperTreeSupport
    • Tree
    • TreeFileLite
    • TreePartitions
    • Trees
    • func
    • Var
    • mrp

Related Topics

  • Documentation overview
    • Previous: Scripts for common tasks
    • Next: Alignment

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Classes and ModulesΒΆ

These are the main classes and modules in p4 that might be useful to the user.

  • Alignment
  • Constraints
  • Data
  • DistanceMatrix
  • GeneticCode
  • Model
  • Mcmc
  • McmcCheckPointReader
  • NexusSets
  • Node
  • Numbers
  • PosteriorSamples
  • QuartetJoining
  • ReducedStrictConsensus
  • STMcmc
  • Sequence
  • SequenceList
  • SuperTreeSupport
  • Tree
  • TreeFileLite
  • TreePartitions
  • Trees
  • func
  • Var
  • mrp
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